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Parameters used in simulations of Ca2+ spark formation and detection as shown in Fig 3.2.

Local calcium release from the SR

Parameter definition value unit
iCa Amplitude of elemental Ca2+ release 2 pA
F Faraday's constant 96500 C/mol
Z Valence of Ca2+ ion 2

Diffusion of free CA2+ and fluo-3

Parameter definition value unit
Dc Diffusion coefficient of free Ca2+ in cytosol 250 µm^2 s^-1
Db Diffusion coefficient of fluo-d and Ca2+-fluo-3 20(varied) µm^2 s^-1

Diffusion of free CA2+ and fluo-3

Parameter definition value unit
vpump-max Maximum rate of Ca2+ reuptake 208 µM / s
Kpump Michaelis constant 0.184 µM
m Hill coefficient 3.9

Diffusion of free CA2+ and fluo-3

Parameter definition value unit
FWHMz Axial full width at half-maximum 0.8 µm
FWHMxy Lateral full width at half-maximum 0.8 µm

Miscellaneous

Parameter definition value unit
[Ca2+]inf Intracellular free Ca2+ at rest 0.1 µM
Modified from Smith, G.D., Keizer, J., Stern, M., Lederer, W.J., and Cheng, H.,, Biophys. J., 75, 15, 1998. with permission