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RSReacEnzyme

Michaelis Menten enzyme kinetics

A subclass of RSreac implementing Michaelis-Menten enzyme kinetics. This is a simplification of the scheme: A + enzyme <--> A-enzyme <--> B + enzyme. Such a scheme would normally require four rate constants, for the forward and backward parts of each transition. However, to a good approximation in many cases this can be reduced to two: k-m, the enzyme concentration at which the rate A --> B is half maximal and v-max, the maximum rate when the enzyme concentration is so high that the A + enzyme <--> A-enzyme equilibrium is almost completely to the right.

Assuming the return from B + enzyme --> A-enzyme to be negligible, this still requires one more parameter which is here taken as the ratio of kr, the dissociation rate of A-enzyme, to v-max, k-r-by-v-max.

The importance of the M-M expression is that in modeling actual reactions the behavior of the schemes is often insensitive to the value of k-r-by-v-max which may change by an order of magnitude from Unity with little apparent effect.

    field     type       contents / default value    
k_m double 1.0 k_m: enzyme concentration for half maximal rate
v_max double 1.0 v_max: maximum rate
k_r_by_v_max double 4.0 k_r_by_v_max: ratio of dissociation rate to v_max
RSReacEnzyme-results object CalcResults