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ExcisedPatchCalc

calculation methods for excised patches containing kinetic scheme channels

Preliminary calculation methods for kinetic scheme (KSChannel) channels in excised patches. This is a temporary class which ignores the IVlaw in the KSChannel, and instead specifies a reversal potential, Erev (mV) for the channel. There are nchan channels in the patch, and the simulation is run for runtime (ms) in steps of timestep. Optionally noise is added as an AR1 process of amplitude noiseAmp (pA) and regression parameter noiseRP.

*** this class will be superseded with something more realistic ***

    field     type       contents / default value    
timestep double 0.1 variable: timestep type: double
runtime double 100.0 variable: runtime type: double
V_0 double -70.0 variable: V_0 type: double
Erev double 0.0 variable: Erev type: double
nchan integer 1 variable: nchan type: integer
noiseAmp double 1.0 variable: noiseAmp type: double
noiseRP double 0.7 variable: noiseRP type: double
ExcisedPatchCalc-results object CalcResults
channel list selection; boolean; one only KSChannel